You did use -new- stretch bolts for the flywheel and shaft?!...
The gearbox version you have can leak a bit more hypoid than then 1981-on... so a small slippage may be caused.
But... you feel it through the frame... that is not very reassuring...
Twitch at the rear???
Machanical scraping sound???
How is the bevel?
Have you had it apart?
Did the large nut in the shaft end of the bevel sit tight?
What is the play of the bevels and ballbearings?
What is the condition of the brakeshoes (or do you have a disc-brake)?
Is the shaft firmly attached to the gearbox?
Feel over the gaitor to ensure that all 4 bolts are still up there...
Do this test:
- have the frontwheel pushed down into the ground lifting the rear clear off the ground. (I prefer to do this on a lift and secure the front with truck load straps).
- start the engine. Try to get an even 3000rpm. Put it in 1st and then shift up and down trhough the gears.
- Use a stetochope (= a large screwdriver, tire iron, steel-rod, what ever till do); place it against the side of the gearbox (both sides, front and rear).
IF there is a major problem inside the gearbox you will hear it! Should you have a bad bearing... it sounds like a stone quarry(!) i.e. really bad; and as to lift the stetoscop off the gearbox the sound "vanishes".
This test should be done every 1500-2000miles and whenever you feel like it.
You will also hear what is going on in the shaft and bevelbox this way.
There are magnetic plugs in you gearbox, shaft, finaldrive and engine - right?
If not -
Wunderlich GmbH | complete your BMW carries all needed sizes. Art.-Nr. 8154010
Magnet-Ölablassschraube*
Louis have a wide variety of magnetic plugs:
www.louis.de - Motorrad & Freizeit
http://www.louis.de/_30603859026886e...nr_gr=10002912
As the twitch and metal scaping - does it happen only in accelleration or will it occur as you decellerate or keep even speed?
How are the wheelbearings?
When did you regrease them last?
Was the play correct?