Welcome to the HUBB.
There are no ferries from Magadan to anywhere.
There are occasional transport ships which will take your car / bike to Vladivostok, but you would need to speak Russian and inquire locally (or get someone to do it for you). I only know locals who have used it (I drove both ways). I don't think they take passengers.
Russia, like every country in the Former USSR, does not use the Carnet de Passage for private vehicles.
All these questions could be answered by searching the site, so check the search and you may find more information that is useful to you.
EO
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EurasiaOverland a memoir of one quarter of a million kilometres by road through all of the Former USSR, Western and Southern Asia.
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